Reference Interval Estimation using Real-World Data

Documentation for package ‘refineR’ version 1.0.0

addGrid	Add a grid to an existing plot.
as.rgb	Convert color-names or RGB-code to possibly semi-transparent RGB-code.
ashDensity	Estimate density of distribution employing the R package "ash" using R-wrapper function.
BoxCox	One-parameter Box-Cox transformation.
calculateCostHist	Calculate costs for a specific combinations of lambda, muVec and sigmaVec.
estimateStartValues	Helper function to estimate search regions for mu and sigma and to get the region around main peak 'ab'
findPeaksAndValleys	Find the index of the peaks and valleys of the density estimation.
findRI	Function to estimate reference intervals for a single population
generateHistData	Generate list with histogram data.
getRI	Method to calculate reference intervals (percentiles) for objects of class 'RWDRI'
getSumForPArea	Helper function to calculate the amount of observed and estimated data points within specified regions around the peak.
invBoxCox	Inverse of the one-parameter Box-Cox transformation.
optimizeGrid	Helper function for grid search for mu and sigma.
plot.RWDRI	Standard plot method for objects of class 'RWDRI'
pnormApprox	Approximate calculation of CDF of normal distribution.
print.RWDRI	Standard print method for objects of class 'RWDRI'
testcase1	Simulated Testcase 1.
testcase2	Simulated Testcase 2.
testcase3	Simulated Testcase 3.
testcase4	Simulated Testcase 4.
testParam	Helper function to find optimal parameters lambda, mu and sigma.