Package: outbreaker2
Version: 1.0.1
Date: 2018-03-06
Title: Bayesian Reconstruction of Disease Outbreaks by Combining
        Epidemiologic and Genomic Data
Authors@R: c(person("Thibaut", "Jombart",
                    email = "thibautjombart@gmail.com",
		    role = c("aut")),
	     person("Finlay", "Campbell",
	            email = "f.campbell15@imperial.ac.uk",
		    role = c("aut", "cre")),
	     person("Rich", "Fitzjohn",
	            email = "r.fitzjohn@imperial.ac.uk",
		    role = c("aut")),
	     person("Gerry", "Tonkin-Hill",
	            email = "gqt20@cam.ac.uk",
		    role = c("ctb")))
Maintainer: Finlay Campbell <f.campbell15@imperial.ac.uk>
Description: Bayesian reconstruction of disease outbreaks using epidemiological
    and genetic information. Jombart T, Cori A, Didelot X, Cauchemez S, Fraser
    C and Ferguson N. 2014. <doi:10.1371/journal.pcbi.1003457>.
License: MIT + file LICENSE
Suggests: coda, microbenchmark, testthat, knitr, rmarkdown, igraph
Depends: R (>= 3.0.0)
Imports: utils, methods, stats, grDevices, Rcpp, ape, ggplot2,
        magrittr, visNetwork
LazyData: true
LinkingTo: Rcpp
RoxygenNote: 6.0.1
SystemRequirements: C++11
VignetteBuilder: knitr
NeedsCompilation: yes
Packaged: 2018-03-06 17:19:23 UTC; fc1915
Author: Thibaut Jombart [aut],
  Finlay Campbell [aut, cre],
  Rich Fitzjohn [aut],
  Gerry Tonkin-Hill [ctb]
Repository: CRAN
Date/Publication: 2018-03-06 17:52:21 UTC
Built: R 3.4.4; x86_64-w64-mingw32; 2019-04-25 21:45:37 UTC; windows
Archs: i386, x64
