Package: phylotaR
Type: Package
Title: Automated Phylogenetic Sequence Cluster Identification from
        'GenBank'
Version: 1.0.0
Authors@R: c(person("Hannes", "Hettling", role = "aut"), person("Rutger", "Vos", role = "aut"), person("Alexander", "Zizka", role = "aut"), person("Dom", "Bennett", role = c("aut", "cre"), email = "dominic.john.bennett@gmail.com"), person("Alexandre", "Antonelli", role = c("aut")))
Maintainer: Dom Bennett <dominic.john.bennett@gmail.com>
Description: A pipeline for the identification, within taxonomic groups, of
    orthologous sequence clusters from
    'GenBank' <https://www.ncbi.nlm.nih.gov/genbank/> as the first step in a
    phylogenetic analysis. The pipeline depends on a local alignment search tool
    and is, therefore, not dependent on differences in gene naming conventions
    and naming errors.
License: MIT + file LICENSE
URL: https://github.com/ropensci/phylotaR#readme
BugReports: https://github.com/ropensci/phylotaR/issues
SystemRequirements: BLAST+ (>=2.0)
Depends: R (>= 3.3.0), methods,
Imports: igraph, rentrez, XML, ggplot2, sys, treeman, treemapify,
        R.utils
Suggests: testthat, knitr, rmarkdown
RoxygenNote: 6.0.1
VignetteBuilder: knitr
X-schema.org-isPartOf: https://ropensci.org
NeedsCompilation: no
Packaged: 2018-07-31 14:02:27 UTC; dom
Author: Hannes Hettling [aut],
  Rutger Vos [aut],
  Alexander Zizka [aut],
  Dom Bennett [aut, cre],
  Alexandre Antonelli [aut]
Repository: CRAN
Date/Publication: 2018-07-31 15:50:03 UTC
Built: R 3.4.4; ; 2019-04-25 22:21:53 UTC; windows
