# Signature Overrepresentation Analysis

## Documentation for package ‘sigora’ version 3.0.1

- DESCRIPTION file.

## Help Pages

sigora-package | Signature Overrepresentation Analysis
genesFromRandomPathways | Function to randomly select genes associated with randomly pathways.
getGenes | List genes involved in present GPS for a specific pathway in the summary_results
idmap | Identifier mappings for protein coding genes.
kegH | Pathway GPS data, extracted from KEGG repository (Human).
kegM | Pathway GPS data, extracted from KEGG repository (Mouse).
makeGPS | Create your own Signature Object.
nciTable | NCI human gene-pathway associations.
ora | Traditional Overrepresentation Analysis.
reaH | Pathway GPS data, extracted from the Reactome repository (Human).
reaM | Pathway GPS data, extracted from Reactome repository (Mouse).
sigora | Sigora's main function.