bi.npmle                Bivariate NPMLE
expit                   Expit function
ldd                     Latent dependency detection
logit                   Logit function
maxtest                 Max test for detecting simultaneous signals
neb.predict             Nonparametric empirical Bayes classifier
                        without annotations; prediction
neb.train               Nonparametric empirical Bayes classifier
                        without annotations; training
nebula.bin.predict      Nonparametric empirical Bayes classifier using
                        latent annotations: binary indicators;
                        prediction
nebula.bin.train        Nonparametric empirical Bayes classifier using
                        latent annotations: binary indicators; training
nebula.chisq.bin.predict
                        Nonparametric empirical Bayes classifier using
                        latent annotations: chi-square test statistics
                        and binary indicators; prediction
nebula.chisq.bin.train
                        Nonparametric empirical Bayes classifier using
                        latent annotations: chi-square test statistics
                        and binary indicators; training
nebula.chisq.predict    Nonparametric empirical Bayes classifier using
                        latent annotations: chi-square test statistics;
                        prediction
nebula.chisq.train      Nonparametric empirical Bayes classifier using
                        latent annotations: chi-square test statistics;
                        training
nebula.predict          Nonparametric empirical Bayes classifier using
                        latent annotations: wrapper function; predict
nebula.train            Nonparametric empirical Bayes classifier using
                        latent annotations: wrapper function; training
nfsdr                   Nonparametric false simultaneous discovery rate
                        control
nfsdr2                  Nonparametric false simultaneous discovery rate
                        control, two thresholds
nfsdr2_all              Nonparametric false simultaneous discovery rate
                        control, two thresholds - report all thresholds
prs.predict             Polygenic risk score; prediction
prs.predict.cv          Polygenic risk score; prediction for classifier
                        trained with CV
prs.train               Polygenic risk score (given only allele
                        frequencies); training
prs.train.cv            Polygenic risk score (given only allele
                        frequencies); training with CV
tri.npmle               Trivariate NPMLE
uni.npmle               Univariate NPMLE
