Package: metaboGSE
Type: Package
Title: Gene Set Enrichment Analysis via Integration of Metabolic
        Networks and RNA-Seq Data
Version: 1.2.3
Depends: R (>= 3.4.0), sybil (>= 2.0.4), ape (>= 3.3)
Suggests: glpkAPI (>= 1.3.0), clpAPI (>= 1.2.7), topGO (>= 2.24.0),
        unix, KernSmooth, KEGGREST, survival, ctc, knitr, rmarkdown
Imports: utils, stats, methods, parallel, grDevices, graphics, Matrix,
        AnnotationDbi (>= 1.32.3), GO.db (>= 3.2.2)
Packaged: 2020-01-03 08:43:19 UTC; ttran
Author: Van Du T. Tran [aut, cre], Marco Pagni [aut]
Maintainer: Van Du T. Tran <thuong.tran@sib.swiss>
Description: Integrates metabolic networks and RNA-seq data to construct condition-specific series of metabolic sub-networks and applies to gene set enrichment analysis (Tran et al. (2018) <doi:10.1093/bioinformatics/bty929>).
License: GPL-3
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.0.2
VignetteBuilder: knitr
NeedsCompilation: no
Repository: CRAN
Date/Publication: 2020-01-07 13:00:02 UTC
Built: R 3.5.3; ; 2020-04-22 05:27:33 UTC; windows
