addWeak                 Add Weak Mutation Types
bootstrapCancerGenomes
                        Bootstrap a Mutation Count Matrix
citation                Print Citation Information
decipherMutationalProcesses
                        Decipher Mutational Processes Contributing to a
                        Collection of Genomic Mutations
deconvoluteMutCounts    Deconvolute Mutation Counts
do.nmf                  Perform Non-negative Matrix Factorization
evaluateStability       Evaluate Results Stability
extractSignatures       Extract Signatures from Genomic Mutational
                        Catalogs
filterOutIterations     Remove Iterations that Generated Outlier
                        Results
getTestRunArgs          Generate Arguments for Running Examples and
                        Mock Runs
leadZeros               Add Leading Zeros to a Number
mutSignatures-package   Computational Framework for Deciphering Cancer
                        Mutational Signatures
plotSignatureExposures
                        Generate Plot Signature
removeWeak              Remove Mutation Types Not Meeting the Threshold
setMutClusterParams     Set Parameters for Extracting Mutational
                        Signatures
setMutCountObject       Create a Mutation Count Object Suitable for
                        Signatures Extraction
silhouetteMLB           Silhouette Analysis
