# Phylogenetic Comparative Methods for High-Dimensional Traits

## Documentation for package ‘phylocurve’ version 2.0.10

- DESCRIPTION file.

## Help Pages

phylocurve-package | Phylogenetic Comparative Methods for Function-Valued and Other High-Dimensional Traits
compare.models | Compare evolutionary hypotheses
evo.model | Fit an evolutionary model
fast.geomorph.compare.evol.rates | Fast covariance-based implementations of distance-based methods
fast.geomorph.compare.multi.evol.rates | Fast covariance-based implementations of distance-based methods
fast.geomorph.phylo.integration | Fast covariance-based implementations of distance-based methods
fast.geomorph.physignal | Fast covariance-based implementations of distance-based methods
fast.geomorph.procD.pgls | Fast covariance-based implementations of distance-based methods
get.aligned.function.data | Estimate aligned data for function-valued traits
get.tip.coefficients | Estimate regression coefficients for tip species curves
GP.fit | Fit Gaussian process curves to species data
K.mult | Test phylogenetic signal (Kmult) using phylogenetic simulation
multipic | Efficient PIC algorithm for multiple traits
nonlinear.fit | Fit nonlinear curves to species data
paint.edges | Paint tree edges based on species regimes
phylocurve | Ancestral curve reconstruction for logistic regression (glm with logit link)
phylocurve.generalized | Align curves of any shape
phylocurve.trim | Trim aligned curves
polynomial.fit | Fit polynomial curves to species data using stepwise regression
prep_multipic | Prep multipic
print.evo.model | Print evo.model
sim.curves | Simulate function-valued curve evolution
sim.traits | Simulate multivariate trait evolution
ultraFastAnc | Ultra-fast maximum likelihood ancestral state reconstruction