%nin%	nin
align_comm_V	align_comm_V
boot_ci	boot_ci
boot_ci.cor_phylo	cor_phylo
communityPGLMM	pglmm
communityPGLMM.matrix.structure	pglmm-matrix-structure
communityPGLMM.plot.re	pglmm-plot-re
communityPGLMM.predicted.values	pglmm-predicted-values
communityPGLMM.profile.LRT	pglmm-profile-LRT
communityPGLMM.show.re	pglmm-plot-re
comm_a	comm_a
comm_b	comm_b
cor_phylo	cor_phylo
envi	envi
fitted.communityPGLMM	fitted.communityPGLMM
fixed.effects	fixef
fixef	fixef
fixef.communityPGLMM	fixef
get_design_matrix	get_design_matrix_pglmm
match_comm_tree	match_comm_tree
pcd	pcd
pcd_pred	pcd_pred
pglmm	pglmm
pglmm.compare	pglmm.compare
pglmm.matrix.structure	pglmm-matrix-structure
pglmm.plot.ranef	pglmm-plot-re
pglmm.plot.re	pglmm-plot-re
pglmm.predicted.values	pglmm-predicted-values
pglmm.profile.LRT	pglmm-profile-LRT
phylotree	phylotree
plot.communityPGLMM	pglmm-plot-data
prep_dat_pglmm	prep_dat_pglmm
print.communityPGLMM	print.communityPGLMM
print.cor_phylo	cor_phylo
print.cp_refits	refit_boots
print.pglmm.compare	print.pglmm.compare
psc	psd
psd	psd
pse	psd
psr	psd
psv	psd
psv.spp	psd
random.effects	ranef
ranef	ranef
ranef.communityPGLMM	ranef
refit_boots	refit_boots
residuals.communityPGLMM	residuals.communityPGLMM
rm_site_noobs	rm_site_noobs
rm_sp_noobs	rm_sp_noobs
summary.communityPGLMM	summary.communityPGLMM
summary.pglmm.compare	summary.pglmm.compare
traits	traits
vcv2	vcv2
