Testing Neighbor Effects in Marker-Based Regressions


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Documentation for package ‘rNeighborGWAS’ version 1.0.0

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calc_PVEnei Calculating proportion of phenotypic variation explained (PVE) by neighbor effects
delta_PVE Estimating the effective scale of neighbor effects
min_dist Calculating the minimum distance
neiGWAS Genome-wide association mapping of neighbor effects
nei_coval Calculating neighbor genotypic identity
nei_simu Simulating phenotypes with self and neighbor effects
qtl_pheno_simu Simulating phenotype values with neighbor effects.
w Calculating a distance decay weight