clone                   Copy an R6 class object completely
dataset                 The dataset in the microeco package
dropallfactors          Remove all factors in a data frame
env_data_16S            The environmental factors for the 16S dataset
                        in the microeco package
fungi_func_FUNGuild     The FUNGuild database for fungi trait
                        identification in the microeco package
fungi_func_FungalTraits
                        The FungalTraits database for fungi trait
                        identification in the microeco package
ko_map                  The KEGG pathway annotation database in the
                        microeco package
meco2phyloseq           Transform microtable object in microeco package
                        to the phyloseq object in phyloseq package.
microtable              Create microtable object to store and manage
                        all the basic files.
otu_table_16S           The OTU table of the 16S dataset in the
                        microeco package
otu_table_ITS           The OTU table of the ITS dataset in the
                        microeco package
phylo_tree_16S          The phylogenetic tree of 16S dataset in the
                        microeco package
phyloseq2meco           Transform the phyloseq object in phyloseq
                        package to microtable object in microeco
                        package.
prok_func               The prokaryotic trait database in the microeco
                        package
sample_info_16S         The sample information of 16S dataset in the
                        microeco package
sample_info_ITS         The sample information of ITS dataset in the
                        microeco package
taxonomy_table_16S      The taxonomic information of 16S dataset in the
                        microeco package
taxonomy_table_ITS      The taxonomic information of ITS dataset in the
                        microeco package
tidy_taxonomy           Clear up the taxonomic table to make taxonomic
                        assignments consistent.
trans_abund             Create trans_abund object to transform
                        taxonomic abundance for plotting.
trans_alpha             Create trans_alpha object for alpha diveristy
                        statistics and plotting.
trans_beta              Create trans_beta object for the analysis of
                        distance matrix of beta-diversity.
trans_diff              Create trans_diff object for the differential
                        analysis on the taxonomic abundance.
trans_env               Create trans_env object for the analysis of the
                        effects of environmental factors on
                        communities.
trans_func              Create trans_func object for functional
                        analysis.
trans_network           Create trans_network object for co-occurrence
                        network analysis.
trans_nullmodel         Create trans_nullmodel object.
trans_venn              Create trans_venn object.
