bivTM	bivTM
BLUE	BLUE
BLUEs.pheno	BLUEs.pheno
bx	bx
colour.bar	colour.bar
convert_mappoly_to_phased.maplist	convert_mappoly_to_phased.maplist
count_recombinations	count_recombinations
estimate_GIC	estimate_GIC
estimate_IBD	estimate_IBD
exploreQTL	exploreQTL
fast_IBD	fast_IBD
fast_permute	fast_permute
findPeak	findPeak
findSupport	findSupport
fx	fx
GIC_4x	GIC_4x
hexa.list	hexa.list
hexTM	hexTM
hmm_IBD	hmm_IBD
IBD_4x	IBD_4x
import_IBD	import_IBD
impute_dosages	impute_dosages
list.depth	list.depth
mapseq	mapseq
meiosis_report	meiosis_report
mr.ls	mr.ls
NettletonDoerge	NettletonDoerge
Nstates.fun	Nstates.fun
phased_maplist.4x	phased_maplist.4x
Phenotypes_4x	Phenotypes_4x
plotLinearQTL	plotLinearQTL
plotLinearQTL_list	plotLinearQTL_list
plotQTL	plotQTL
plotRecLS	plotRecLS
polyqtlR	polyqtlR
probgeno_df_to_array	probgeno_df_to_array
PVE	PVE
QTLscan	QTLscan
qtl_LODs.4x	qtl_LODs.4x
quadTM	quadTM
Rec_Data_4x	Rec_Data_4x
rem.hex	rem.hex
rem.quad	rem.quad
segList_2x	segList_2x
segList_3x	segList_3x
segList_4x	segList_4x
segList_6x	segList_6x
segMaker	segMaker
singleMarkerRegression	singleMarkerRegression
SNP_dosages.4x	SNP_dosages.4x
spline_IBD	spline_IBD
state_fun	state_fun
test_dosage_matrix	test_dosage_matrix
test_IBD_list	test_IBD_list
test_probgeno_df	test_probgeno_df
thinmap	thinmap
TM.biv.2	TM.biv.2
TM.biv.4	TM.biv.4
TM.biv.6	TM.biv.6
TM.hex	TM.hex
TM.quad	TM.quad
TMfun.2x_B	TMfun.2x_B
TMfun.3x_BB	TMfun.3x_BB
TMfun.3x_QB	TMfun.3x_QB
TMfun.4x_BB	TMfun.4x_BB
TMfun.4x_BQ	TMfun.4x_BQ
TMfun.4x_QB	TMfun.4x_QB
TMfun.4x_QQ	TMfun.4x_QQ
TMfun.6x_BB	TMfun.6x_BB
TMfun.6x_BH	TMfun.6x_BH
TMfun.6x_HB	TMfun.6x_HB
TMfun.6x_HH	TMfun.6x_HH
visualiseGIC	visualiseGIC
visualiseHaplo	visualiseHaplo
visualisePairing	visualisePairing
visualiseQTLeffects	visualiseQTLeffects
weighted.var	weighted.var
write.logheader	write.logheader
