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| addROIs | Add ROIs (Point, Ellipse or Rectangle) to an Image x, y -> Point x, y, rx, ry -> Ellipse x, y, w, h -> Rectangle theta: Rotation about theta text: An optional comment |
| addROIs-method | Add ROIs (Point, Ellipse or Rectangle) to an Image x, y -> Point x, y, rx, ry -> Ellipse x, y, w, h -> Rectangle theta: Rotation about theta text: An optional comment |
| attachDataframe | Attaches a dataframe to an OME object |
| attachDataframe-method | Attaches a dataframe to an OME object |
| attachFile | Attach a file to an OME object |
| attachFile-method | Attach a file to an OME object |
| availableDataframes | Get the dataframes (name/id/annotationID) attached to an OME object |
| availableDataframes-method | Get the dataframes (name/id/annotationID) attached to an OME object |
| cast | Casts a general OMERO object into its proper type, e. g. Plate (if possible) |
| cast-method | Casts a general OMERO object into its proper type, e. g. Plate (if possible) |
| connect | Connect to an OMERO server |
| connect-method | Connect to an OMERO server |
| Dataset | Dataset |
| Dataset-class | Dataset |
| delete | Deletes an OME object |
| delete-method | Deletes an OME object |
| deleteFile | Delete a file attached to an OME object |
| deleteFile-method | Delete a file attachend to an OME object |
| describeDataframe | Describe a dataframe attached to an OME object |
| describeDataframe-method | Describe a dataframe attached to an OME object |
| disconnect | Disconnect from an OMERO server |
| disconnect-method | Disconnect from an OMERO server |
| getAnnotations | Get annotations attached to an OME object. Type, Namespace, Name, Content, ID, FileID (in case of file annotations) |
| getAnnotations-method | Get annotations attached to an OME object. Type, Namespace, Name, Content, ID, FileID (in case of file annotations) |
| getAnnotations-method | Get annotations attached to an OME object. Type, Namespace, Name, Content, ID, FileID (in case of file annotations) |
| getChannelNames | Get the channel names of an Image |
| getChannelNames-method | Get the channel names of an Image |
| getColumn | Get the column index of the specific well |
| getColumn-method | Get the column index of the specific well |
| getContext | Get the current SecurityContext |
| getContext-method | Get the current SecurityContext |
| getDatasets | Get all datasets of the logged in user |
| getDatasets-method | Get all datasets of the logged in user |
| getDatasets-method | Get all datasets of a project |
| getGateway | Get the reference to the Java Gatway |
| getGateway-method | Get the reference to the Java Gatway |
| getGroupContext | Get the current group context |
| getGroupContext-method | Get the current group context |
| getImages | Get all images of a container (Dataset, Project, Screen, Plate or Well) |
| getImages-method | Get all images of a dataset |
| getImages-method | Get all images of a plate |
| getImages-method | Get all images of a project |
| getImages-method | Get all images of a screen |
| getImages-method | Get the fields of the specific well |
| getOMEROID | Get the ID of the OME object |
| getOMEROID-method | Get the ID of the OME object |
| getOMEROType | Get the type of the OME object |
| getOMEROType-method | Get the type of the OME object |
| getPixelValues | Get the pixel values of an Image. An error will be thrown if invalid z, t or c values are specified. |
| getPixelValues-method | Get the pixel values of an Image. An error will be thrown if invalid z, t or c values are specified. |
| getPlates | Get all plates of the logged in user |
| getPlates-method | Get all plates of the logged in user |
| getPlates-method | Get the plates of the specific screen |
| getProjects | Get all projects of the logged in user |
| getProjects-method | Get all projects of the logged in user |
| getROIs | Get the ROIs (Point, Ellipse or Rectangle) of an Image x, y -> Point x, y, rx, ry -> Ellipse x, y, w, h -> Rectangle theta: Rotation about theta text: An optional comment |
| getROIs-method | Get the ROIs (Point, Ellipse or Rectangle) of an Image x, y -> Point x, y, rx, ry -> Ellipse x, y, w, h -> Rectangle theta: Rotation about theta text: An optional comment |
| getRow | Get the row index of the specific well |
| getRow-method | Get the row index of the specific well |
| getScreens | Get all screens of the logged in user |
| getScreens-method | Get all screens of the logged in user |
| getThumbnail | Get the thumbnail for an Image (as JPEG) |
| getThumbnail-method | Get the thumbnail for an Image (as JPEG) |
| getWells | Get the wells of the specific plate |
| getWells-method | Get the wells of the specific plate |
| Image | Image |
| Image-class | Image |
| length-method | Get the number of fields |
| loadCSV | Load a CSV file from the server |
| loadCSV-method | Load a CSV file from the server |
| loadDataframe | Load a dataframe attached to an OME object |
| loadDataframe-method | Load a dataframe attached to an OME object |
| loadObject | Load an object from the server |
| loadObject-method | Load an object from the server |
| OMERO | OME remote object class This is basically a wrapper around the Pojo's of the Java Gateway with a reference to the server. |
| OMERO-class | OME remote object class This is basically a wrapper around the Pojo's of the Java Gateway with a reference to the server. |
| OMEROServer | OMEROServer class Provides access to an OMERO server |
| OMEROServer-class | OMEROServer class Provides access to an OMERO server |
| Plate | Plate |
| Plate-class | Plate |
| Project | Project |
| Project-class | Project |
| Screen | Screen |
| Screen-class | Screen |
| searchFor | Search for OMERO objects |
| searchFor-method | Search for OMERO objects |
| setGroupContext | Set a different group context |
| setGroupContext-method | Set a different group context |
| Well | Well |
| Well-class | Well |