Package: spathial
Type: Package
Title: Evolutionary Analysis
Version: 0.1.2
Authors@R: c(person("Erika", "Gardini", email = "erika.gardini4@unibo.it", role = c("aut", "cre")),
  person("Federico M.", "Giorgi", email = "federico.giorgi@unibo.it", role = c("aut")),
  person("Sergio", "Decherchi", email = "sergio.decherchi@iit.it", role = c("aut")),
  person("Andrea", "Cavalli", email = "andrea.cavalli@iit.it", role = c("aut")))
Author: Erika Gardini [aut, cre],
  Federico M. Giorgi [aut],
  Sergio Decherchi [aut],
  Andrea Cavalli [aut]
Maintainer: Erika Gardini <erika.gardini4@unibo.it>
Description: A generic tool for manifold analysis. It allows to infer a relevant transition or evolutionary path which can highlights the features involved in a specific process. 'spathial' can be useful in all the scenarios where the temporal (or pseudo-temporal) evolution is the main problem (e.g. tumor progression). The algorithm for finding the principal path is described in: Ferrarotti et al., (2019) <doi:10.1109/TNNLS.2018.2884792>."
License: GPL-3
Encoding: UTF-8
LazyData: TRUE
RoxygenNote: 7.0.2
Depends: R (>= 3.5)
NeedsCompilation: no
Imports: pracma, igraph, matrixStats, MASS, Rtsne, class, utils, knitr,
        rmarkdown, irlba
VignetteBuilder: utils, knitr, rmarkdown
Packaged: 2020-04-10 17:51:40 UTC; erikagardini
Repository: CRAN
Date/Publication: 2020-04-10 18:20:02 UTC
Built: R 3.6.3; ; 2021-05-12 20:56:41 UTC; windows
