Vis-NIR Spectral Analysis Wrapper

Documentation for package ‘waves’ version 0.1.1

AggregateSpectra	Aggregate data based on grouping variables and a user-provided function
DoPreprocessing	Preprocess spectral data according to user-designated method
FilterSpectra	Filter spectral data frame based on Mahalanobis distance
FormatCV	Format multiple trials with or without overlapping genotypes into training and test sets according to user-provided cross validation scheme
ikeogu.2017	Example vis-NIRS and reference dataset
PlotSpectra	Plot spectral data, highlighting outliers as identified using Mahalanobis distance
PredictFromSavedModel	Use provided model object to predict trait values with input dataset
SaveModel	Save spectral prediction model and model performance statistics
TestModelPerformance	Test the performance of spectral models