Package: yaps
Title: Track Estimation using YAPS (Yet Another Positioning Solver)
Version: 1.2.5
Authors@R: c(	person("Henrik", "Baktoft", email = "hba@aqua.dtu.dk", role = c("cre", "aut"), comment=c(ORCID = "0000-0002-3644-4960")),
				person("Karl", "Gjelland", role=c("aut"), comment=c(ORCID = "0000-0003-4036-4207")),
				person("Uffe H.", "Thygesen", role=c("aut"), comment=c(ORCID = "0000-0002-4311-6324")),
				person("Finn", "Økland", role=c("aut"), comment=c(ORCID = "0000-0002-1938-5460"))
			)
Description: Estimate tracks of animals tagged with acoustic transmitters. 'yaps' was introduced in 2017 as a transparent open-source tool to estimate positions of fish (and other aquatic animals) tagged with acoustic transmitters. Based on registrations of acoustic transmitters on hydrophones positioned in a fixed array, 'yaps' enables users to synchronize the collected data (i.e. correcting for drift in the internal clocks of the hydrophones/receivers) and subsequently to estimate tracks of the tagged animals. The paper introducing 'yaps' is available in open access at Baktoft, Gjelland, Økland & Thygesen (2017) <doi:10.1038/s41598-017-14278-z>. Also check out our cookbook with a completely worked through example at Baktoft, Gjelland, Økland, Rehage, Rodemann, Corujo, Viadero & Thygesen (2019) <DOI:10.1101/2019.12.16.877688>. Additional tutorials will eventually make their way onto the project website at <https://baktoft.github.io/yaps/>.
Depends: R (>= 3.5.0)
License: GPL-3
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.1.1
LinkingTo: Rcpp, TMB, RcppEigen
Imports: circular, cowplot, data.table, ggplot2, ggrepel, nloptr, plyr,
        Rcpp, reshape2, splusTimeSeries, stats, tictoc, TMB, viridis,
        zoo
Suggests: caTools, covr, knitr, rmarkdown, testthat (>= 2.1.0), vdiffr
URL: https://github.com/baktoft/yaps, https://baktoft.github.io/yaps/
BugReports: https://github.com/baktoft/yaps/issues
NeedsCompilation: yes
Packaged: 2021-04-07 18:37:23 UTC; hbak
Author: Henrik Baktoft [cre, aut] (<https://orcid.org/0000-0002-3644-4960>),
  Karl Gjelland [aut] (<https://orcid.org/0000-0003-4036-4207>),
  Uffe H. Thygesen [aut] (<https://orcid.org/0000-0002-4311-6324>),
  Finn Økland [aut] (<https://orcid.org/0000-0002-1938-5460>)
Maintainer: Henrik Baktoft <hba@aqua.dtu.dk>
Repository: CRAN
Date/Publication: 2021-04-13 21:30:02 UTC
Built: R 3.6.3; x86_64-w64-mingw32; 2021-05-12 23:45:28 UTC; windows
Archs: i386, x64
