# Analyze Bacterial Pangenomes in R with 'Pagoo'

## Documentation for package ‘pagoo’ version 0.3.12

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

load_pangenomeRDS | Load A Pagoo Pangenome
pagoo | Create a Pagoo Object
panaroo_2_pagoo | Read panaroos's output into a pagoo's R6 class object
PgR6 | PgR6 basic class
PgR6M | PgR6 class with methods.
PgR6MS | PgR6 class with Methods and Sequences.
roary_2_pagoo | Read roary's output into a pagoo's R6 class object