# Efficient Simulation of HDX-MS Data and Tools for the Statistical Analysis

## Documentation for package ‘powerHaDeX’ version 1.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

powerHDX-package | A short title line describing what the package does
add_column | Complete data frame with columns
calculate_hdx_power | Calculate power of statistical tests for HDX experiments
calculate_peptide_mass | Peptide mass
create_experimental_file | Create experimental file
fix_columns_names_types | Standardize column names and types
get_deuteration_single_timepoint | Calculates deuteration for given timepoint
get_noisy_deuteration_curves | Replicated deuterium uptake curves
get_spectra_list | Get a list of spectra
plot_spectra | Draw mass spectra
powerHaDeX | powerHaDeX
powerHDX | A short title line describing what the package does
prepare_input_peptides | Prepare input for 'create_experimental_file'
simulate_theoretical_spectra | Simulate theoretical spectra of a deuterated peptide over time
test_hadex_data | Apply tests for HaDeX data
test_hdx_analyzer | HDX-Analyzer model
test_houde | Houde's test for deuteration curves
test_memhdx_model | MEMHDX model
test_semiparametric | Semiparametric test for differences in deuteration levels