
%% 20180215: this does not cooperate with knitr, but someday we hope
%% it might.
%% This controls display of code chunks
\usepackage{ae,fancyvrb,relsize,listings}
\providecommand{\Sweavesize}{\normalsize}
\providecommand{\Rsize}{}
\renewcommand{\Rsize}{\normalsize}
\providecommand{\Routsize}{\scriptsize}

\providecommand{\Rcolor}{\color[rgb]{0.1, 0.1, 0.1}}
\providecommand{\Routcolor}{\color[rgb]{0.2, 0.2, 0.2}}
\providecommand{\Rcommentcolor}{\color[rgb]{0.101, 0.43, 0.432}}

\providecommand{\Rbackground}{\color[gray]{0.91}}
\providecommand{\Routbackground}{\color[gray]{0.935}}
% Can specify \color[gray]{1} for white background or just \color{white}

\lstdefinestyle{Rinput}{
  language=R,
  escapechar=`,
  fancyvrb=false,%
  tabsize=2,%
  breaklines=true,
  breakatwhitespace=true,%
  captionpos=b,%
  frame=single,%
  framerule=0.2pt,%
  framesep=1pt,%
  showstringspaces=false,%
  basicstyle=\Rsize\Rcolor\ttfamily,%
  columns=fixed%,
  \lst@ifdisplaystyle\scriptsize\fi,%,
  commentstyle=\Rcommentcolor\ttfamily,%
  identifierstyle=,%
  keywords=\bfseries,%
  keywordstyle=\color[rgb]{0, 0.5, 0.5},
  escapeinside={(*}{*)},
  literate={~}{{$\sim$}}1{==}{{=\,=}}2{--}{{-\,-}}2,
  alsoother={$},
  alsoletter={.<-},%
  otherkeywords={!,!=,~,$$,*,\&,\%/\%,\%*\%,\%\%,<-,<<-,/},%
  backgroundcolor=\Rbackground,%
  numbers=left,%
  stepnumber=5,
  firstnumber=1,
  numberstyle={\tiny}
}%

% Other options of interest:
% frame=single,framerule=0.1pt,framesep=1pt,rulecolor=\color{blue},
% numbers=left,numberstyle=\tiny,stepnumber=1,numbersep=7pt,
% keywordstyle={\bf\Rcolor}

\lstdefinestyle{Routput}{fancyvrb=false,
  literate={~}{{$\sim$}}1{R^2}{{$R^{2}$}}2{^}{{$^{\scriptstyle\wedge}$}}1{R-squared}{{$R^{2}$}}2,%
  basicstyle=\Routcolor\Routsize\ttfamily,%
  backgroundcolor=\Routbackground,
  language=R,
  escapechar=`,
  fancyvrb=false,%
  tabsize=2,%
  breaklines=true,
  breakatwhitespace=true,%
  captionpos=b,%
  frame=single,%
  framerule=0.2pt,%
  framesep=1pt,%
  showstringspaces=false,%
  columns=fixed%,
  \lst@ifdisplaystyle\scriptsize\fi,%
  identifierstyle=,%
  keywords=\bfseries,%
  keywordstyle=\color[rgb]{0, 0.5, 0.5},
  escapeinside={(*}{*)},
  literate={~}{{$\sim$}}1 {==}{{=\,=}}2,
  alsoother={$},
  alsoletter={.<-},%
  otherkeywords={!,!=,~,$,*,\&,\%/\%,\%*\%,\%\%,<-,<<-,/},
  numbers=left,
  numberstyle={\tiny}
}

\let\Schunk\relax
\let\Sinput\relax
\newenvironment{Schunk}{}{}
\let\Scode\relax
\let\Soutput\relax
\lstnewenvironment{Sinput}{\lstset{style=Rinput}}{}
\lstnewenvironment{Scode}{\lstset{style=Rinput}}{}
\lstnewenvironment{Soutput}{\lstset{style=Routput}}{}

\lstset{tabsize=2, breaklines=true, style=Rinput, breakatwhitespace=true}


\usepackage{xcolor}
\definecolor{light-gray}{gray}{0.90}%
\usepackage{realboxes}%
\providecommand*{\code}[1]{\texttt{#1}}%
\renewcommand{\code}[1]{%
\Colorbox{light-gray}{#1}%
}%
