Last updated on 2022-04-24 03:52:55 CEST.
| Package | ERROR | NOTE | OK |
|---|---|---|---|
| MBNMAdose | 2 | 4 | 6 |
| MBNMAtime | 1 | 11 |
Current CRAN status: ERROR: 2, NOTE: 4, OK: 6
Version: 0.4.1
Check: data for non-ASCII characters
Result: NOTE
Note: found 6 marked Latin-1 strings
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64
Version: 0.4.1
Check: examples
Result: ERROR
Running examples in ‘MBNMAdose-Ex.R’ failed
The error most likely occurred in:
> ### Name: get.relative
> ### Title: Calculates relative effects between treatments in an MBNMA model
> ### Aliases: get.relative
>
> ### ** Examples
>
> # Using the osteoarthritis data
> network <- mbnma.network(osteopain)
Values for `agent` with dose = 0 have been recoded to `Placebo`
agent is being recoded to enforce sequential numbering and allow inclusion of `Placebo`
Values for `class` with dose = 0 have been recoded to `Placebo`
class is being recoded to enforce sequential numbering and allow inclusion of `Placebo`
>
> expon <- mbnma.run(network, fun=dexp(), method="random")
'onset' parameters are on exponential scale to ensure they take positive values on the natural scale
`likelihood` not given by user - set to `normal` based on data provided
`link` not given by user - set to `identity` based on assigned value for `likelihood`
.onLoad failed in loadNamespace() for 'rjags', details:
call: dyn.load(file, DLLpath = DLLpath, ...)
error: unable to load shared object '/Volumes/Builds/packages/high-sierra-x86_64/Rlib/4.1/rjags/libs/rjags.so':
dlopen(/Volumes/Builds/packages/high-sierra-x86_64/Rlib/4.1/rjags/libs/rjags.so, 10): Library not loaded: /usr/local/lib/libjags.4.dylib
Referenced from: /Volumes/Builds/packages/high-sierra-x86_64/Rlib/4.1/rjags/libs/rjags.so
Reason: image not found>
> # Calculate relative effects between:
> # Celebrex 100mg/d, Celebrex 200mg/d, Tramadol 100mg/d
> rel.eff <- get.relative(expon, treatments=list("Celebrex"=c(100,200), "Tramadol"=100))
Error in get.relative(expon, treatments = list(Celebrex = c(100, 200), :
1 assertions failed:
* Variable 'mbnma': Must inherit from class 'mbnma', but has class
* 'list'.
Calls: get.relative -> <Anonymous>
Execution halted
Flavors: r-release-macos-x86_64, r-oldrel-macos-x86_64
Version: 0.4.1
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
...
--- re-building ‘mbnmadose.Rmd’ using rmarkdown
Values for `agent` with dose = 0 have been recoded to `Placebo`
agent is being recoded to enforce sequential numbering and allow inclusion of `Placebo`
Values for `agent` with dose = 0 have been recoded to `Placebo`
agent is being recoded to enforce sequential numbering and allow inclusion of `Placebo`
Quitting from lines 208-211 (mbnmadose.Rmd)
Error: processing vignette 'mbnmadose.Rmd' failed with diagnostics:
.onLoad failed in loadNamespace() for 'rjags', details:
call: dyn.load(file, DLLpath = DLLpath, ...)
error: unable to load shared object '/Volumes/Builds/packages/high-sierra-x86_64/Rlib/4.1/rjags/libs/rjags.so':
dlopen(/Volumes/Builds/packages/high-sierra-x86_64/Rlib/4.1/rjags/libs/rjags.so, 10): Library not loaded: /usr/local/lib/libjags.4.dylib
Referenced from: /Volumes/Builds/packages/high-sierra-x86_64/Rlib/4.1/rjags/libs/rjags.so
Reason: image not found
--- failed re-building ‘mbnmadose.Rmd’
SUMMARY: processing the following file failed:
‘mbnmadose.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavors: r-release-macos-x86_64, r-oldrel-macos-x86_64
Current CRAN status: NOTE: 1, OK: 11
Version: 0.2.1
Check: Rd cross-references
Result: NOTE
Undeclared package ‘gemtc’ in Rd xrefs
Flavor: r-devel-linux-x86_64-fedora-clang