CRAN Package Check Results for Maintainer ‘Rebecca Fisher <r.fisher at aims.gov.au>’

Last updated on 2022-04-24 03:53:03 CEST.

Package ERROR OK
bayesnec 3 9
ssddata 12

Package bayesnec

Current CRAN status: ERROR: 3, OK: 9

Version: 2.0.2.3
Check: tests
Result: ERROR
     Running ‘testthat.R’ [367s/470s]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     > library(bayesnec)
     Loading required package: brms
     Loading required package: Rcpp
     Loading 'brms' package (version 2.17.0). Useful instructions
     can be found by typing help('brms'). A more detailed introduction
     to the package is available through vignette('brms_overview').
    
     Attaching package: 'brms'
    
     The following object is masked from 'package:stats':
    
     ar
    
     Loading required package: ggplot2
     >
     > test_check("bayesnec")
    
     Attaching package: 'dplyr'
    
     The following object is masked from 'package:testthat':
    
     matches
    
     The following objects are masked from 'package:stats':
    
     filter, lag
    
     The following objects are masked from 'package:base':
    
     intersect, setdiff, setequal, union
    
     All models failed the rhat_cutoff of 1
     Dropping the model(s) nec3param, ecxexp as they are not valid in the case of a logit link.
     Dropping the model(s) nec3param, ecxexp as they are not valid in the case of a logit link.
     Dropping the model(s) nec3param, ecxexp as they are not valid in the case of a log link.
     Dropping the model(s) nec3param, ecxexp as they are not valid in the case of a logit link.
     Dropping the model(s) nec3param, ecxexp as they are not valid in the case of a logit link.
     Dropping the model(s) neclin, neclinhorme, ecxlin as they are not valid in the case of a beta with identity link.
     Dropping the model(s) neclin, neclinhorme, ecxlin as they are not valid in the case of a binomial with identity link.
     Dropping the model neclin, neclinhorme, ecxlin, nechormepwr01 as they are not valid in the case of a poisson with identity link.
     Dropping the model neclin, neclinhorme, ecxlin, nechormepwr01 as they are not valid in the case of a negbinomial with identity link.
     Dropping the model neclin, neclinhorme, ecxlin, nechormepwr01 as they are not valid in the case of a Gamma with identity link.
     Dropping the model(s) nec3param, ecxexp as they are not valid in the case of Gaussian y data.
     Probability density plots saved to file 114OIcw5v16CTtFq.pdf
     [ FAIL 4 | WARN 0 | SKIP 0 | PASS 402 ]
    
     ══ Failed tests ════════════════════════════════════════════════════════════════
     ── Failure (test-define_prior.R:83:3): check proper output structure ───────────
     p_b$bound[p_b$nlpar == "top"] == "" is not TRUE
    
     `actual`:
     `expected`: TRUE
     ── Failure (test-define_prior.R:84:3): check proper output structure ───────────
     p_b$bound[p_b$nlpar == "bot"] == "" is not TRUE
    
     `actual`:
     `expected`: TRUE
     ── Failure (test-define_prior.R:87:3): check proper output structure ───────────
     p_c$bound[p_c$nlpar == "top"] == "" is not FALSE
    
     `actual`:
     `expected`: FALSE
     ── Failure (test-define_prior.R:88:3): check proper output structure ───────────
     p_c$bound[p_c$nlpar == "bot"] == "" is not FALSE
    
     `actual`:
     `expected`: FALSE
    
     [ FAIL 4 | WARN 0 | SKIP 0 | PASS 402 ]
     Error: Test failures
     Execution halted
Flavor: r-release-linux-x86_64

Version: 2.0.2.3
Check: tests
Result: ERROR
     Running 'testthat.R' [447s]
    Running the tests in 'tests/testthat.R' failed.
    Complete output:
     > library(testthat)
     > library(bayesnec)
     Loading required package: brms
     Loading required package: Rcpp
     Loading 'brms' package (version 2.17.0). Useful instructions
     can be found by typing help('brms'). A more detailed introduction
     to the package is available through vignette('brms_overview').
    
     Attaching package: 'brms'
    
     The following object is masked from 'package:stats':
    
     ar
    
     Loading required package: ggplot2
     >
     > test_check("bayesnec")
    
     Attaching package: 'dplyr'
    
     The following object is masked from 'package:testthat':
    
     matches
    
     The following objects are masked from 'package:stats':
    
     filter, lag
    
     The following objects are masked from 'package:base':
    
     intersect, setdiff, setequal, union
    
     All models failed the rhat_cutoff of 1
     Dropping the model(s) nec3param, ecxexp as they are not valid in the case of a logit link.
     Dropping the model(s) nec3param, ecxexp as they are not valid in the case of a logit link.
     Dropping the model(s) nec3param, ecxexp as they are not valid in the case of a log link.
     Dropping the model(s) nec3param, ecxexp as they are not valid in the case of a logit link.
     Dropping the model(s) nec3param, ecxexp as they are not valid in the case of a logit link.
     Dropping the model(s) neclin, neclinhorme, ecxlin as they are not valid in the case of a beta with identity link.
     Dropping the model(s) neclin, neclinhorme, ecxlin as they are not valid in the case of a binomial with identity link.
     Dropping the model neclin, neclinhorme, ecxlin, nechormepwr01 as they are not valid in the case of a poisson with identity link.
     Dropping the model neclin, neclinhorme, ecxlin, nechormepwr01 as they are not valid in the case of a negbinomial with identity link.
     Dropping the model neclin, neclinhorme, ecxlin, nechormepwr01 as they are not valid in the case of a Gamma with identity link.
     Dropping the model(s) nec3param, ecxexp as they are not valid in the case of Gaussian y data.
     Probability density plots saved to file 715912c14vREpCWOwo.pdf
     [ FAIL 4 | WARN 0 | SKIP 0 | PASS 402 ]
    
     ══ Failed tests ════════════════════════════════════════════════════════════════
     ── Failure (test-define_prior.R:83:3): check proper output structure ───────────
     p_b$bound[p_b$nlpar == "top"] == "" is not TRUE
    
     `actual`:
     `expected`: TRUE
     ── Failure (test-define_prior.R:84:3): check proper output structure ───────────
     p_b$bound[p_b$nlpar == "bot"] == "" is not TRUE
    
     `actual`:
     `expected`: TRUE
     ── Failure (test-define_prior.R:87:3): check proper output structure ───────────
     p_c$bound[p_c$nlpar == "top"] == "" is not FALSE
    
     `actual`:
     `expected`: FALSE
     ── Failure (test-define_prior.R:88:3): check proper output structure ───────────
     p_c$bound[p_c$nlpar == "bot"] == "" is not FALSE
    
     `actual`:
     `expected`: FALSE
    
     [ FAIL 4 | WARN 0 | SKIP 0 | PASS 402 ]
     Error: Test failures
     Execution halted
Flavor: r-release-windows-x86_64

Version: 2.0.2.3
Check: tests
Result: ERROR
     Running 'testthat.R' [460s]
    Running the tests in 'tests/testthat.R' failed.
    Complete output:
     > library(testthat)
     > library(bayesnec)
     Loading required package: brms
     Loading required package: Rcpp
     Loading 'brms' package (version 2.17.0). Useful instructions
     can be found by typing help('brms'). A more detailed introduction
     to the package is available through vignette('brms_overview').
    
     Attaching package: 'brms'
    
     The following object is masked from 'package:stats':
    
     ar
    
     Loading required package: ggplot2
     >
     > test_check("bayesnec")
    
     Attaching package: 'dplyr'
    
     The following object is masked from 'package:testthat':
    
     matches
    
     The following objects are masked from 'package:stats':
    
     filter, lag
    
     The following objects are masked from 'package:base':
    
     intersect, setdiff, setequal, union
    
     All models failed the rhat_cutoff of 1
     Dropping the model(s) nec3param, ecxexp as they are not valid in the case of a logit link.
     Dropping the model(s) nec3param, ecxexp as they are not valid in the case of a logit link.
     Dropping the model(s) nec3param, ecxexp as they are not valid in the case of a log link.
     Dropping the model(s) nec3param, ecxexp as they are not valid in the case of a logit link.
     Dropping the model(s) nec3param, ecxexp as they are not valid in the case of a logit link.
     Dropping the model(s) neclin, neclinhorme, ecxlin as they are not valid in the case of a beta with identity link.
     Dropping the model(s) neclin, neclinhorme, ecxlin as they are not valid in the case of a binomial with identity link.
     Dropping the model neclin, neclinhorme, ecxlin, nechormepwr01 as they are not valid in the case of a poisson with identity link.
     Dropping the model neclin, neclinhorme, ecxlin, nechormepwr01 as they are not valid in the case of a negbinomial with identity link.
     Dropping the model neclin, neclinhorme, ecxlin, nechormepwr01 as they are not valid in the case of a Gamma with identity link.
     Dropping the model(s) nec3param, ecxexp as they are not valid in the case of Gaussian y data.
     Probability density plots saved to file 3vHbZuSX2410Ids14.pdf
     [ FAIL 4 | WARN 0 | SKIP 0 | PASS 402 ]
    
     == Failed tests ================================================================
     -- Failure (test-define_prior.R:83:3): check proper output structure -----------
     p_b$bound[p_b$nlpar == "top"] == "" is not TRUE
    
     `actual`:
     `expected`: TRUE
     -- Failure (test-define_prior.R:84:3): check proper output structure -----------
     p_b$bound[p_b$nlpar == "bot"] == "" is not TRUE
    
     `actual`:
     `expected`: TRUE
     -- Failure (test-define_prior.R:87:3): check proper output structure -----------
     p_c$bound[p_c$nlpar == "top"] == "" is not FALSE
    
     `actual`:
     `expected`: FALSE
     -- Failure (test-define_prior.R:88:3): check proper output structure -----------
     p_c$bound[p_c$nlpar == "bot"] == "" is not FALSE
    
     `actual`:
     `expected`: FALSE
    
     [ FAIL 4 | WARN 0 | SKIP 0 | PASS 402 ]
     Error: Test failures
     Execution halted
Flavor: r-oldrel-windows-ix86+x86_64

Package ssddata

Current CRAN status: OK: 12