CRAN Package Check Results for Package rtables

Last updated on 2022-04-24 03:52:37 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.5.0 26.69 321.64 348.33 ERROR
r-devel-linux-x86_64-debian-gcc 0.5.0 22.86 228.86 251.72 OK
r-devel-linux-x86_64-fedora-clang 0.5.0 403.13 OK
r-devel-linux-x86_64-fedora-gcc 0.5.0 391.55 OK
r-patched-linux-x86_64 0.5.0 25.05 300.15 325.20 OK
r-release-linux-x86_64 0.5.0 22.03 306.79 328.82 OK
r-release-macos-arm64 0.5.0 OK
r-release-macos-x86_64 0.5.0 OK
r-release-windows-x86_64 0.5.0 167.00 345.00 512.00 OK
r-oldrel-macos-arm64 0.5.0 OK
r-oldrel-macos-x86_64 0.5.0 OK
r-oldrel-windows-ix86+x86_64 0.5.0 47.00 362.00 409.00 ERROR

Check Details

Version: 0.5.0
Check: for code/documentation mismatches
Result: WARN
    Codoc mismatches from documentation object 'table_shell':
    table_shell
     Code: function(tt, widths = NULL, col_gap = 3, linesep = "<U+2014>")
     Docs: function(tt, widths = NULL, col_gap = 3, linesep = "<U+2014>")
     Mismatches in argument default values:
     Name: 'linesep' Code: "<U+2014>" Docs: "<U+2014>"
    table_shell_str
     Code: function(tt, widths = NULL, col_gap = 3, linesep = "<U+2014>")
     Docs: function(tt, widths = NULL, col_gap = 3, linesep = "<U+2014>")
     Mismatches in argument default values:
     Name: 'linesep' Code: "<U+2014>" Docs: "<U+2014>"
    
    Codoc mismatches from documentation object 'tostring':
    \S4method{toString}{VTableTree}
     Code: function(x, widths = NULL, col_gap = 3, linesep = "<U+2014>")
     Docs: function(x, widths = NULL, col_gap = 3, linesep = "<U+2014>")
     Mismatches in argument default values:
     Name: 'linesep' Code: "<U+2014>" Docs: "<U+2014>"
Flavor: r-devel-linux-x86_64-debian-clang

Version: 0.5.0
Check: tests
Result: ERROR
     Running 'testthat.R' [114s/132s]
    Running the tests in 'tests/testthat.R' failed.
    Complete output:
     > library(testthat)
     > library(xml2)
     > library(tibble)
     > library(rtables)
     Loading required package: magrittr
    
     Attaching package: 'magrittr'
    
     The following objects are masked from 'package:testthat':
    
     equals, is_less_than, not
    
     Loading required package: formatters
     >
     > test_check("rtables", reporter = JunitReporter$new(file = "unit_test_results.xml"))
     ARM1 ARM2
     <U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014>
     M 256 (50.79%) 248 (50.00%)
     F 248 (49.21%) 248 (50.00%)
     setosa versicolor virginica
     (N=50) (N=50) (N=50)
     <U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014>
     Sepal.Length
     Mean (sd) 5.01 (0.35) 5.94 (0.52) 6.59 (0.64)
     Variance 0.124 0.266 0.404
     Min - Max 4.3 - 5.8 4.9 - 7.0 4.9 - 7.9
     Petal.Width
     Mean (sd) 0.25 (0.11) 1.33 (0.20) 2.03 (0.27)
     Variance 0.011 0.039 0.075
     Min - Max 0.1 - 0.6 1.0 - 1.8 1.4 - 2.5
     hi lo
     <U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014>
     label path
     <U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014>
     ARM1 ARM, ARM1
     Male ARM, ARM1, SEX, M
     Female ARM, ARM1, SEX, F
     ARM2 ARM, ARM2
     Male ARM, ARM2, SEX, M
     Female ARM, ARM2, SEX, F
     rowname node_class path
     <U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014><U+2014>
     Caucasian (n) ContentRow root, RACE, WHITE, @content, Caucasian (n)
     Level A ContentRow root, RACE, WHITE, FACTOR2, A, @content, Level A
     Age Analysis LabelRow root, RACE, WHITE, FACTOR2, A, AGE
     mean DataRow root, RACE, WHITE, FACTOR2, A, AGE, mean
     median DataRow root, RACE, WHITE, FACTOR2, A, AGE, median
     Age Analysis redux LabelRow root, RACE, WHITE, FACTOR2, A, AgeRedux
     range DataRow root, RACE, WHITE, FACTOR2, A, AgeRedux, range
     Level B ContentRow root, RACE, WHITE, FACTOR2, B, @content, Level B
     Age Analysis LabelRow root, RACE, WHITE, FACTOR2, B, AGE
     mean DataRow root, RACE, WHITE, FACTOR2, B, AGE, mean
     median DataRow root, RACE, WHITE, FACTOR2, B, AGE, median
     Age Analysis redux LabelRow root, RACE, WHITE, FACTOR2, B, AgeRedux
     range DataRow root, RACE, WHITE, FACTOR2, B, AgeRedux, range
     African American (n) ContentRow root, RACE, BLACK, @content, African American (n)
     Level A ContentRow root, RACE, BLACK, FACTOR2, A, @content, Level A
     Age Analysis LabelRow root, RACE, BLACK, FACTOR2, A, AGE
     mean DataRow root, RACE, BLACK, FACTOR2, A, AGE, mean
     median DataRow root, RACE, BLACK, FACTOR2, A, AGE, median
     Age Analysis redux LabelRow root, RACE, BLACK, FACTOR2, A, AgeRedux
     range DataRow root, RACE, BLACK, FACTOR2, A, AgeRedux, range
     Level B ContentRow root, RACE, BLACK, FACTOR2, B, @content, Level B
     Age Analysis LabelRow root, RACE, BLACK, FACTOR2, B, AGE
     mean DataRow root, RACE, BLACK, FACTOR2, B, AGE, mean
     median DataRow root, RACE, BLACK, FACTOR2, B, AGE, median
     Age Analysis redux LabelRow root, RACE, BLACK, FACTOR2, B, AgeRedux
     range DataRow root, RACE, BLACK, FACTOR2, B, AgeRedux, range
     level1 DataRow root, VAR3, level1
     level2 DataRow root, VAR3, level2
     Error: Test failures
     Execution halted
Flavor: r-devel-linux-x86_64-debian-clang

Version: 0.5.0
Check: tests
Result: ERROR
     Running 'testthat.R' [117s]
    Running the tests in 'tests/testthat.R' failed.
    Complete output:
     > library(testthat)
     > library(xml2)
     > library(tibble)
     > library(rtables)
     Loading required package: magrittr
    
     Attaching package: 'magrittr'
    
     The following objects are masked from 'package:testthat':
    
     equals, is_less_than, not
    
     Loading required package: formatters
     >
     > test_check("rtables", reporter = JunitReporter$new(file = "unit_test_results.xml"))
     ARM1 ARM2
     <c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97>
     M 256 (50.79%) 248 (50.00%)
     F 248 (49.21%) 248 (50.00%)
     setosa versicolor virginica
     (N=50) (N=50) (N=50)
     <c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97>
     Sepal.Length
     Mean (sd) 5.01 (0.35) 5.94 (0.52) 6.59 (0.64)
     Variance 0.124 0.266 0.404
     Min - Max 4.3 - 5.8 4.9 - 7.0 4.9 - 7.9
     Petal.Width
     Mean (sd) 0.25 (0.11) 1.33 (0.20) 2.03 (0.27)
     Variance 0.011 0.039 0.075
     Min - Max 0.1 - 0.6 1.0 - 1.8 1.4 - 2.5
     hi lo
     <c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97>
     label path
     <c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97>
     ARM1 ARM, ARM1
     Male ARM, ARM1, SEX, M
     Female ARM, ARM1, SEX, F
     ARM2 ARM, ARM2
     Male ARM, ARM2, SEX, M
     Female ARM, ARM2, SEX, F
     rowname node_class path
     <c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97><c2><97>
     Caucasian (n) ContentRow root, RACE, WHITE, @content, Caucasian (n)
     Level A ContentRow root, RACE, WHITE, FACTOR2, A, @content, Level A
     Age Analysis LabelRow root, RACE, WHITE, FACTOR2, A, AGE
     mean DataRow root, RACE, WHITE, FACTOR2, A, AGE, mean
     median DataRow root, RACE, WHITE, FACTOR2, A, AGE, median
     Age Analysis redux LabelRow root, RACE, WHITE, FACTOR2, A, AgeRedux
     range DataRow root, RACE, WHITE, FACTOR2, A, AgeRedux, range
     Level B ContentRow root, RACE, WHITE, FACTOR2, B, @content, Level B
     Age Analysis LabelRow root, RACE, WHITE, FACTOR2, B, AGE
     mean DataRow root, RACE, WHITE, FACTOR2, B, AGE, mean
     median DataRow root, RACE, WHITE, FACTOR2, B, AGE, median
     Age Analysis redux LabelRow root, RACE, WHITE, FACTOR2, B, AgeRedux
     range DataRow root, RACE, WHITE, FACTOR2, B, AgeRedux, range
     African American (n) ContentRow root, RACE, BLACK, @content, African American (n)
     Level A ContentRow root, RACE, BLACK, FACTOR2, A, @content, Level A
     Age Analysis LabelRow root, RACE, BLACK, FACTOR2, A, AGE
     mean DataRow root, RACE, BLACK, FACTOR2, A, AGE, mean
     median DataRow root, RACE, BLACK, FACTOR2, A, AGE, median
     Age Analysis redux LabelRow root, RACE, BLACK, FACTOR2, A, AgeRedux
     range DataRow root, RACE, BLACK, FACTOR2, A, AgeRedux, range
     Level B ContentRow root, RACE, BLACK, FACTOR2, B, @content, Level B
     Age Analysis LabelRow root, RACE, BLACK, FACTOR2, B, AGE
     mean DataRow root, RACE, BLACK, FACTOR2, B, AGE, mean
     median DataRow root, RACE, BLACK, FACTOR2, B, AGE, median
     Age Analysis redux LabelRow root, RACE, BLACK, FACTOR2, B, AgeRedux
     range DataRow root, RACE, BLACK, FACTOR2, B, AgeRedux, range
     level1 DataRow root, VAR3, level1
     level2 DataRow root, VAR3, level2
     Error: Test failures
     Execution halted
Flavor: r-oldrel-windows-ix86+x86_64