Last updated on 2022-04-24 03:53:07 CEST.
| Package | NOTE | OK |
|---|---|---|
| lmeNB | 12 | |
| lmeNBBayes | 12 | |
| RSKC | 2 | 10 |
Current CRAN status: NOTE: 12
Version: 1.3
Check: R code for possible problems
Result: NOTE
CP1.ar1: no visible global function definition for 'integrate'
MCCP.ar1: no visible global function definition for 'integrate'
Pmax.non: no visible global function definition for 'dnbinom'
Pmax.non: no visible global function definition for 'pnbinom'
Pmax1: no visible global function definition for 'integrate'
Psum.non: no visible global function definition for 'dnbinom'
Psum.non: no visible global function definition for 'pnbinom'
Psum1: no visible global function definition for 'integrate'
RElmeNB: no visible global function definition for 'integrate'
ar1.2.mmg: no visible global function definition for 'dgamma'
ar1.fun: no visible global function definition for 'dnbinom'
ar1.intg: no visible global function definition for 'dgamma'
ar1.lk: no visible global function definition for 'integrate'
ar1.ln.intg: no visible global function definition for 'dlnorm'
ar1.ln2.mmg: no visible global function definition for 'dlnorm'
ar1.mm.ln: no visible global function definition for 'dlnorm'
ar1.mmg: no visible global function definition for 'dgamma'
ar22.fun: no visible global function definition for 'dnbinom'
ar22.fun: no visible global function definition for 'pnbinom'
cum.fun: no visible global function definition for 'dgamma'
cum.fun: no visible global function definition for 'pnbinom'
cum1.ln: no visible global function definition for 'dlnorm'
cum1.ln: no visible global function definition for 'pnbinom'
densYijGivenYij_1AndGY: no visible global function definition for
'pnbinom'
densYijGivenYij_1AndGY: no visible global function definition for
'dnbinom'
dens_Yi.gY: no visible global function definition for 'dnbinom'
fitParaAR1: no visible global function definition for 'optim'
fitParaIND: no visible global function definition for 'optim'
fitSemiAR1: no visible global function definition for 'optim'
fitSemiAR1: no visible global function definition for 'optimize'
fitSemiIND: no visible global function definition for 'optim'
fitSemiIND: no visible global function definition for 'optimize'
formulaToDat: no visible global function definition for 'model.matrix'
formulaToDat: no visible global function definition for
'model.response'
formulaToDat: no visible global function definition for 'model.frame'
formulaToDat: no visible binding for global variable 'na.omit'
formulaToDat: no visible global function definition for 'update'
index.batch: no visible global function definition for 'sd'
index.batch: no visible global function definition for 'quantile'
index.batch: no visible global function definition for 'model.response'
index.batch: no visible global function definition for 'model.frame'
int.denRE: no visible global function definition for 'dlnorm'
int.denRE: no visible global function definition for 'dgamma'
int.fun: no visible global function definition for 'dgamma'
int1.ln: no visible global function definition for 'dlnorm'
lk.fun: no visible global function definition for 'integrate'
lk.ln.fun: no visible global function definition for 'integrate'
lmeNB: no visible global function definition for 'optim'
lmeNB.sp.ind: no visible global function definition for 'var'
lmeNB.sp.ind: no visible binding for global variable 'quantile'
max.fun: no visible global function definition for 'dgamma'
max.fun: no visible global function definition for 'pnbinom'
max.ln: no visible global function definition for 'dlnorm'
max.ln: no visible global function definition for 'pnbinom'
mmS.fun: no visible global function definition for 'rnbinom'
pp.ci: no visible global function definition for 'qnorm'
ppv.ci: no visible global function definition for 'qnorm'
print.LinearMixedEffectNBFreq: no visible global function definition
for 'qnorm'
rNBME.R: no visible global function definition for 'rgamma'
rNBME.R: no visible global function definition for 'rlnorm'
rNBME.R: no visible global function definition for 'runif'
rNBME.R: no visible global function definition for 'rbinom'
rNBME.R: no visible global function definition for 'rnorm'
rNBME.R: no visible global function definition for 'rnbinom'
rbb: no visible global function definition for 'rbeta'
rbb: no visible global function definition for 'rbinom'
rnb.ar1: no visible global function definition for 'rnbinom'
Undefined global functions or variables:
dgamma dlnorm dnbinom integrate model.frame model.matrix
model.response na.omit optim optimize pnbinom qnorm quantile rbeta
rbinom rgamma rlnorm rnbinom rnorm runif sd update var
Consider adding
importFrom("stats", "dgamma", "dlnorm", "dnbinom", "integrate",
"model.frame", "model.matrix", "model.response", "na.omit",
"optim", "optimize", "pnbinom", "qnorm", "quantile",
"rbeta", "rbinom", "rgamma", "rlnorm", "rnbinom", "rnorm",
"runif", "sd", "update", "var")
to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-ix86+x86_64
Version: 1.3
Check: LazyData
Result: NOTE
'LazyData' is specified without a 'data' directory
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-ix86+x86_64
Version: 1.3
Check: compiled code
Result: NOTE
File ‘lmeNB/libs/lmeNB.so’:
Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’
It is good practice to register native routines and to disable symbol
search.
See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Current CRAN status: NOTE: 12
Version: 1.3.1
Check: R code for possible problems
Result: NOTE
E.KN: no visible global function definition for 'integrate'
F_inv_beta2 : G: no visible global function definition for 'pbeta'
F_inv_beta2: no visible global function definition for 'uniroot'
colmeansd: no visible binding for global variable 'sd'
condProbCI: no visible binding for global variable 'sd'
condProbCI: no visible binding for global variable 'quantile'
cov2corNA: no visible global function definition for 'cov2cor'
denfun.YZ: no visible global function definition for 'dnbinom'
denfun.YZ: no visible global function definition for 'dnorm'
denfun.norm: no visible global function definition for 'dnbinom'
denfun.norm: no visible global function definition for 'dgamma'
getDIC.FG: no visible global function definition for 'model.matrix'
getDIC.FG: no visible global function definition for 'model.response'
getDIC.FG: no visible global function definition for 'model.frame'
getDIC.FG: no visible global function definition for 'dnbinom'
getDIC_aGh.rGh.G: no visible global function definition for
'model.matrix'
getDIC_aGh.rGh.G: no visible global function definition for
'model.response'
getDIC_aGh.rGh.G: no visible global function definition for
'model.frame'
getM: no visible global function definition for 'qgamma'
getS.StatInMed: no visible global function definition for 'rbeta'
getS.StatInMed: no visible global function definition for 'qbeta'
getS.StatInMed: no visible global function definition for 'dbeta'
getS.StatInMed: no visible global function definition for 'rgamma'
getS.StatInMed: no visible global function definition for 'rnorm'
getS.StatInMed: no visible global function definition for 'dgamma'
getS.StatInMed: no visible global function definition for 'dnorm'
getS.StatInMed: no visible global function definition for 'rnbinom'
getTrueProb : insideIntBeta: no visible global function definition for
'integrate'
getTrueProb : insideIntBeta: no visible binding for global variable
'dbeta'
getTrueProb : insideIntBeta: no visible global function definition for
'dbeta'
getTrueProb: no visible global function definition for 'integrate'
getTrueProb : insideIntGam: no visible global function definition for
'integrate'
getTrueProb : insideIntGam: no visible binding for global variable
'dgamma'
getTrueProb : insideIntGam: no visible global function definition for
'dgamma'
index.YZ: no visible global function definition for 'integrate'
index.batch.Bayes: no visible global function definition for
'model.matrix'
index.batch.Bayes: no visible global function definition for
'model.response'
index.batch.Bayes: no visible global function definition for
'model.frame'
index.gammas: no visible global function definition for 'integrate'
int.M: no visible global function definition for 'dlnorm'
intfun: no visible global function definition for 'dlnorm'
lmeNBBayes: no visible global function definition for 'model.matrix'
lmeNBBayes: no visible global function definition for 'model.response'
lmeNBBayes: no visible global function definition for 'model.frame'
logL.G: no visible global function definition for 'dnbinom'
mixgamma: no visible global function definition for 'dgamma'
numfun.YZ: no visible global function definition for 'dnbinom'
numfun.YZ: no visible global function definition for 'dnorm'
numfun.norm: no visible global function definition for 'dnbinom'
numfun.norm: no visible global function definition for 'dgamma'
piM: no visible global function definition for 'integrate'
plotGs: no visible global function definition for 'median'
plotGs: no visible global function definition for 'hist'
plotGs: no visible global function definition for 'density'
plotGs: no visible global function definition for 'points'
plotHistAcf: no visible global function definition for 'median'
plotHistAcf: no visible global function definition for 'hist'
plotHistAcf: no visible global function definition for 'quantile'
plotHistAcf: no visible global function definition for 'points'
plotHistAcf: no visible global function definition for 'abline'
plotHistAcf: no visible global function definition for 'acf'
plotbeta: no visible global function definition for 'dbeta'
plotbeta: no visible global function definition for 'points'
plotgamma: no visible global function definition for 'dgamma'
plotlnorm: no visible global function definition for 'dlnorm'
plotlnorm: no visible global function definition for 'points'
plotnbinom: no visible global function definition for 'dnbinom'
plotnbinom: no visible global function definition for 'points'
pointsgamma: no visible global function definition for 'dgamma'
pointsgamma: no visible global function definition for 'points'
print.LinearMixedEffectNBBayes: no visible binding for global variable
'sd'
print.LinearMixedEffectNBBayes: no visible binding for global variable
'quantile'
rmvnorm: no visible global function definition for 'rnorm'
Undefined global functions or variables:
abline acf cov2cor dbeta density dgamma dlnorm dnbinom dnorm hist
integrate median model.frame model.matrix model.response pbeta points
qbeta qgamma quantile rbeta rgamma rnbinom rnorm sd uniroot
Consider adding
importFrom("graphics", "abline", "hist", "points")
importFrom("stats", "acf", "cov2cor", "dbeta", "density", "dgamma",
"dlnorm", "dnbinom", "dnorm", "integrate", "median",
"model.frame", "model.matrix", "model.response", "pbeta",
"qbeta", "qgamma", "quantile", "rbeta", "rgamma", "rnbinom",
"rnorm", "sd", "uniroot")
to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-ix86+x86_64
Version: 1.3.1
Check: compiled code
Result: NOTE
File ‘lmeNBBayes/libs/lmeNBBayes.so’:
Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’
It is good practice to register native routines and to disable symbol
search.
See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Current CRAN status: NOTE: 2, OK: 10
Version: 2.4.2
Check: compiled code
Result: NOTE
File ‘RSKC/libs/RSKC.so’:
Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’
It is good practice to register native routines and to disable symbol
search.
See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc