fitPoly: Genotype Calling for Bi-Allelic Marker Assays

Genotyping assays for bi-allelic markers (e.g. SNPs) produce signal intensities for the two alleles. 'fitPoly' assigns genotypes (allele dosages) to a collection of polyploid samples based on these signal intensities. 'fitPoly' replaces the older package 'fitTetra' that was limited (a.o.) to only tetraploid populations whereas 'fitPoly' accepts any ploidy level. Reference: Voorrips RE, Gort G, Vosman B (2011) <doi:10.1186/1471-2105-12-172>.

Version:	3.0.0
Depends:	R (≥ 3.2.0)
Imports:	foreach
Suggests:	devEMF, doParallel, grDevices
Published:	2018-03-16
Author:	Roeland E. Voorrips and Gerrit Gort
Maintainer:	Roeland E. Voorrips <roeland.voorrips at wur.nl>
License:	GPL-2
NeedsCompilation:	no
CRAN checks:	fitPoly results

Documentation:

Reference manual:

fitPoly.pdf

Downloads:

Package source:	fitPoly_3.0.0.tar.gz
Windows binaries:	r-devel: fitPoly_3.0.0.zip, r-release: fitPoly_3.0.0.zip, r-oldrel: fitPoly_3.0.0.zip
macOS binaries:	r-release (arm64): fitPoly_3.0.0.tgz, r-oldrel (arm64): fitPoly_3.0.0.tgz, r-release (x86_64): fitPoly_3.0.0.tgz, r-oldrel (x86_64): fitPoly_3.0.0.tgz

Reverse dependencies:

Reverse suggests:

mappoly

Linking:

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