Changes in version 1.0-12 (10/27/2021)
Changes in version 1.0-11 (07/23/2015)
- Fixed NAMESPACE (non-standard imports)
Changes in version 1.0-9 (5/15/2015)
- Fixed dependencies in NAMESPACE
- Fixed problems with testthat
Changes in version 1.0-8 (1/14/2014)
- score: match_clusters can now be “exact”, “nn” or “weighted”, where weighted replaces all the weighted scores.
- added smooth_transitions (experimental)
- plus_one is now called prior (since it adds a uniform prior for transition probabilities)
- score has now an argument called normalize
Changes in version 1.0-7
- improved plot for tNN
- tNN: centroids stop moving to prevent 2 clusters from colliding
- fixed bug with getting transitions from a TRACDS object with 0 transitions
- find_clusters also accepts now a threshold factor for match_clusters
- score: weights for scoring are now normalized for threshold
- transition from igraph0 to igraph
Changes in version 1.0-6
- Improved performance for prune()
- Added object.size() which also reports memory used by the model
- Switched to igraph0
Changes in version 1.0-5
- Added several methods for score.
- Threshold for pruning and finding rare clusters/transitions is now less or equal instead of just less
Changes in version 1.0-3
- Finished the transition to reference objects implemented using environments.
- transition_table() now has for consistency also the default of add_one set to FALSE.
- last_clustering() was added as an accessor function to tNN.
- ‘igraph’ is now the default plot method.
- Added combining EMMs.
- Added reclustering using tNN.
- Added coloring of states and transitions to plot().
- Added coercion functions as.igraph() and as.graph from TRACDS.
Changes in version 1.0-2